van Ijcken, W. F. J. : rechercher sur Z-Library

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1

Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene

Manfred Kayser, Fan Liu, A. Cecile J.W. Janssens, Fernando Rivadeneira, Oscar Lao, Kate van Duijn, Mark Vermeulen, Pascal Arp, Mila M. Jhamai, Wilfred F.J. van IJcken, Johan T. den Dunnen, Simon Heath

Journal:

The American Journal of Human Genetics

Année:

2008

Fichier:

PDF, 24 KB

2008

2

Three Genome-wide Association Studies and a Linkage Analysis Identify HERC2 as a Human Iris Color Gene

Manfred Kayser, Fan Liu, A. Cecile J.W. Janssens, Fernando Rivadeneira, Oscar Lao, Kate van Duijn, Mark Vermeulen, Pascal Arp, Mila M. Jhamai, Wilfred F.J. van IJcken, Johan T. den Dunnen, Simon Heath

Journal:

The American Journal of Human Genetics

Année:

2008

Langue:

english

Fichier:

PDF, 1.44 MB

english, 2008

3

The ubiquitin-conjugating enzyme HR6B is required for maintenance of X chromosome silencing in mouse spermatocytes and spermatids

Eskeatnaf Mulugeta Achame, Evelyne Wassenaar, Jos W Hoogerbrugge, Esther Sleddens-Linkels, Marja Ooms, Zu-Wen Sun, Wilfred FJ van IJcken, J Anton Grootegoed, Willy M Baarends

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 2.00 MB

english, 2010

4

NARWHAL, a primary analysis pipeline for NGS data

Brouwer, R. W. W., van den Hout, M. C. G. N., Grosveld, F. G., van IJcken, W. F. J.

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 58 KB

english, 2012

5

Difference in signalling between various hormone therapies in endometrium, myometrium and upper part of the vagina

Hanifi-Moghaddam, P., Boers-Sijmons, B., Klaassens, A. H.A., van Wijk, F. H., Van Ijcken, W. F., Van der Spek, P., Verheul, H. A.M., Kloosterboer, H. J., Burger, C. W., Blok, L. J.

Journal:

Human Reproduction

Année:

2007

Langue:

english

Fichier:

PDF, 671 KB

english, 2007

6

Nimbus: A design-driven analyses suite for amplicon based NGS data

Brouwer, R W W, van den Hout, M C G N, Kockx, C E M, Brosens, E, Eussen, B, de Klein, A, Sleutels, F, van IJcken, W F J, Berger, Bonnie

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 666 KB

english, 2018

7

Gene Expression-Based Classification of Non-Small Cell Lung Carcinomas and Survival Prediction

Hou, Jun, Aerts, Joachim, den Hamer, Bianca, van IJcken, Wilfred, den Bakker, Michael, Riegman, Peter, van der Leest, Cor, van der Spek, Peter, Foekens, John A., Hoogsteden, Henk C., Grosveld, Frank,

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.78 MB

english, 2010

8

Colony-Stimulating Factor 1 Receptor (CSF1R) Regulates Microglia Density and Distribution, but Not Microglia Differentiation In Vivo

Oosterhof, Nynke, Kuil, Laura E., van der Linde, Herma C., Burm, Saskia M., Berdowski, Woutje, van Ijcken, Wilfred F.J., van Swieten, John C., Hol, Elly M., Verheijen, Mark H.G., van Ham, Tjakko J.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 9.29 MB

english, 2018

9

Engram-specific transcriptome profiling of contextual memory consolidation

Rao-Ruiz, Priyanka, Couey, Jonathan J., Marcelo, Ivo M., Bouwkamp, Christian G., Slump, Denise E., Matos, Mariana R., van der Loo, Rolinka J., Martins, Gabriela J., van den Hout, Mirjam, van IJcken, W

Journal:

Nature Communications

Année:

2019

Langue:

english

Fichier:

PDF, 5.66 MB

english, 2019

10

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

Carrión, Víctor J., Perez-Jaramillo, Juan, Cordovez, Viviane, Tracanna, Vittorio, de Hollander, Mattias, Ruiz-Buck, Daniel, Mendes, Lucas W., van Ijcken, Wilfred F.J., Gomez-Exposito, Ruth, Elsayed, S

Journal:

Année:

2019

Langue:

english

Fichier:

PDF, 1.30 MB

english, 2019

11

Hemolysis in the spleen drives erythrocyte turnover

Klei, Thomas robert leon, Dalimot, Jill Jasmine, Nota, Benjamin, Veldthuis, Martijn, Mul, Erik, Rademakers, Timo, Hoogenboezem, Mark, Nagelkerke, Sietse Quirijn, van IJcken, Wilfred F.J., Oole, Edwin,

Journal:

Année:

2020

Fichier:

PDF, 1.61 MB

2020

12

HPV related VIN: Highly proliferative and diminished responsiveness to extracellular signals

Lindy A.M. Santegoets, Manon van Seters, Theo J.M. Helmerhorst, Claudia Heijmans-Antonissen, Payman Hanifi-Moghaddam, Patricia C. Ewing, Wilfred F.J. van IJcken, Peter J. van der Spek, Willem I. van d

Journal:

International Journal of Cancer

Année:

2007

Langue:

english

Fichier:

PDF, 750 KB

english, 2007

13

Mobilization of hepatic mesenchymal stem cells from human liver grafts

Qiuwei Pan, Suomi M. G. Fouraschen, Fatima S. F. Aerts Kaya, Monique M. Verstegen, Mario Pescatori, Andrew P. Stubbs, Wilfred van IJcken, Antoine van der Sloot, Ron Smits, Jaap Kwekkeboom, Herold J. M

Journal:

Liver Transplantation

Année:

2011

Langue:

english

Fichier:

PDF, 5.16 MB

english, 2011

14

The FOXF2 pathway in the human prostate stroma

Leonie van der Heul-Nieuwenhuijsen, Natasja Dits, Wilfred Van IJcken, Don de Lange, Guido Jenster

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 413 KB

english, 2009

15

Left ventricular remodeling in swine after myocardial infarction: a transcriptional genomics approach

Diederik W. D. Kuster, Daphne Merkus, Andreas Kremer, Wilfred F. J. van IJcken, Vincent J. de Beer, Adrie J. M. Verhoeven, Dirk J. Duncker

Journal:

Basic Research in Cardiology

Année:

2011

Langue:

english

Fichier:

PDF, 598 KB

english, 2011

16

Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples

Dmitry Zubakov, Eline Hanekamp, Mieke Kokshoorn, Wilfred van IJcken, Manfred Kayser

Journal:

International Journal of Legal Medicine

Année:

2008

Langue:

english

Fichier:

PDF, 337 KB

english, 2008

17

Inflammatory conditions affect gene expression and function of human adipose tissue-derived mesenchymal stem cells

M. J. Crop, C. C. Baan, S. S. Korevaar, J. N. M. IJzermans, M. Pescatori, A. P. Stubbs, W. F. J. Van IJcken, M. H. Dahlke, E. Eggenhofer, W. Weimar, M. J. Hoogduijn

Journal:

Clinical & Experimental Immunology

Année:

2010

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2010

18

Short-term dietary restriction and fasting precondition against ischemia reperfusion injury in mice

James R. Mitchell, Mariëlle Verweij, Karl Brand, Marieke Van De Ven, Natascha Goemaere, Sandra Van Den Engel, Timothy Chu, Flavio Forrer, Cristina Müller, Marion De Jong, Wilfred Van IJcken, Jan N. M.

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 734 KB

english, 2010

19

MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response

Pothof, Joris, Verkaik, Nicole S, van IJcken, Wilfred, Wiemer, Erik A C, Ta, Van T B, van der Horst, Gijsbertus T J, Jaspers, Nicolaas G J, van Gent, Dik C, Hoeijmakers, Jan H J, Persengiev, Stephan P

Journal:

The EMBO Journal

Année:

2009

Langue:

english

Fichier:

PDF, 1.45 MB

english, 2009

20

Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia

Schotte, D, Moqadam, F Akbari, Lange-Turenhout, E A M, Chen, C, van IJcken, W F J, Pieters, R, den Boer, M L

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 622 KB

english, 2011

21

Persistent transcription-blocking DNA lesions trigger somatic growth attenuation associated with longevity

Garinis, George A., Uittenboogaard, Lieneke M., Stachelscheid, Heike, Fousteri, Maria, van Ijcken, Wilfred, Breit, Timo M., van Steeg, Harry, Mullenders, Leon H. F., van der Horst, Gijsbertus T. J., B

Journal:

Nature Cell Biology

Année:

2009

Langue:

english

Fichier:

PDF, 2.31 MB

english, 2009

22

Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes

Szumska, Dorota, Kockx, Christel, van IJcken, Wilfred, Dekkers, Dick H W, Engelen, Erik, Akinci, Umut, Bryne, Jan Christian, Hou, Jun, Gontan, Cristina, Moen, Maaike

Journal:

Nature Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 973 KB

english, 2011

23

RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation

Gontan, Cristina, Achame, Eskeatnaf Mulugeta, Demmers, Jeroen, Barakat, Tahsin Stefan, Rentmeester, Eveline, van IJcken, Wilfred, Grootegoed, J. Anton, Gribnau, Joost

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 918 KB

english, 2012

24

Snail Regulates MyoD Binding-Site Occupancy to Direct Enhancer Switching and Differentiation-Specific Transcription in Myogenesis

Soleimani, Vahab D., Yin, Hang, Jahani-Asl, Arezu, Ming, Hong, Kockx, Christel E.M., van Ijcken, Wilfred F.J., Grosveld, Frank, Rudnicki, Michael A.

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 443 KB

english, 2012

25

A new function of ROD1 in nonsense-mediated mRNA decay

T.F. Brazão, J. Demmers, W. van IJcken, J. Strouboulis, M. Fornerod, L. Romão, F.G. Grosveld

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.23 MB

english, 2012

26

Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells

Igor Martianov, Mohamed-Amin Choukrallah, Arnaud Krebs, Tao Ye, Stephanie Legras, Erikjan Rijkers, Wilfred Van Ijcken, Bernard Jost, Paolo Sassone-Corsi, Irwin Davidson

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2010

27

A Novel Complex, RUNX1-MYEF2, Represses Hematopoietic Genes in Erythroid Cells

van Riel, B., Pakozdi, T., Brouwer, R., Monteiro, R., Tuladhar, K., Franke, V., Bryne, J. C., Jorna, R., Rijkers, E.-J., van Ijcken, W., Andrieu-Soler, C., Demmers, J., Patient, R., Soler, E., Lenhard

Journal:

Molecular and Cellular Biology

Année:

2012

Langue:

english

Fichier:

PDF, 2.37 MB

english, 2012

28

Transcriptional Dominance of Pax7 in Adult Myogenesis Is Due to High-Affinity Recognition of Homeodomain Motifs

Vahab D. Soleimani, Vincent G. Punch, Yoh-ichi Kawabe, Andrew E. Jones, Gareth A. Palidwor, Christopher J. Porter, Joe W. Cross, Jaime J. Carvajal, Christel E.M. Kockx, Wilfred F.J. van IJcken, Theodo

Journal:

Developmental Cell

Année:

2012

Langue:

english

Fichier:

PDF, 1.36 MB

english, 2012

29

The DNA-Binding Protein CTCF Limits Proximal Vκ Recombination and Restricts κ Enhancer Interactions to the Immunoglobulin κ Light Chain Locus

Claudia Ribeiro de Almeida, Ralph Stadhouders, Marjolein J.W. de Bruijn, Ingrid M. Bergen, Supat Thongjuea, Boris Lenhard, Wilfred van IJcken, Frank Grosveld, Niels Galjart, Eric Soler, Rudi W. Hendri

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 915 KB

english, 2011

30

Metabolic Enzyme IMPDH Is Also a Transcription Factor Regulated by Cellular State

Elena N. Kozhevnikova, Jan A. van der Knaap, Alexey V. Pindyurin, Zeliha Ozgur, Wilfred F.J. van Ijcken, Yuri M. Moshkin, C. Peter Verrijzer

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 2.37 MB

english, 2012

31

A systems approach to analyze transcription factors in mammalian cells

Eric Soler, Charlotte Andrieu-Soler, Ernie de Boer, Jan Christian Bryne, Supat Thongjuea, Erikjan Rijkers, Jeroen Demmers, Wilfred van IJcken, Frank Grosveld

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.43 MB

english, 2011

32

Hydroxyurea responsiveness in -thalassemic patients is determined by the stress response adaptation of erythroid progenitors and their differentiation propensity

Pourfarzad, F., von Lindern, M., Azarkeivan, A., Hou, J., Kia, S. K., Esteghamat, F., van IJcken, W., Philipsen, S., Najmabadi, H., Grosveld, F.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 3.06 MB

english, 2013

33

The Microtubule Plus-End Tracking Protein CLASP2 Is Required for Hematopoiesis and Hematopoietic Stem Cell Maintenance

Ksenija Drabek, Laura Gutiérrez, Marcel Vermeij, Thomas Clapes, Sunita R. Patel, Jean-Charles Boisset, Jeffrey van Haren, Ana L. Pereira, Zhe Liu, Umut Akinci, Tatjana Nikolic, Wilfred van IJcken, Mir

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 1.58 MB

english, 2012

34

Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions

Stadhouders, Ralph, Kolovos, Petros, Brouwer, Rutger, Zuin, Jessica, van den Heuvel, Anita, Kockx, Christel, Palstra, Robert-Jan, Wendt, Kerstin S, Grosveld, Frank, van Ijcken, Wilfred, Soler, Eric

Journal:

Bioentrepreneur

Année:

2013

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2013

35

Genome-wide DNA methylation profiling of non-small cell lung carcinomas

Rejane Hughes Carvalho, Vanja Haberle, Jun Hou, Teus van Gent, Supat Thongjuea, Wilfred van IJcken, Christel Kockx, Rutger Brouwer, Erikjan Rijkers, Anieta Sieuwerts, John Foekens, Mirjam van Vroonhov

Journal:

Epigenetics & Chromatin

Année:

2012

Langue:

english

Fichier:

PDF, 1.79 MB

english, 2012

36

miR-141 regulates KEAP1 and modulates cisplatin sensitivity in ovarian cancer cells

van Jaarsveld, M T M, Helleman, J, Boersma, A W M, van Kuijk, P F, van IJcken, W F, Despierre, E, Vergote, I, Mathijssen, R H J, Berns, E M J J, Verweij, J, Pothof, J, Wiemer, E A C

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 800 KB

english, 2013

37

Next generation sequencing of SNPs for non-invasive prenatal diagnosis: challenges and feasibility as illustrated by an application to β-thalassaemia

Papasavva, Thessalia, van IJcken, Wilfred F J, Kockx, Christel E M, van den Hout, Mirjam C G N, Kountouris, Petros, Kythreotis, Loukas, Kalogirou, Eleni, Grosveld, Frank G, Kleanthous, Marina

Journal:

European Journal of Human Genetics

Année:

2013

Langue:

english

Fichier:

PDF, 372 KB

english, 2013

38

MicroRNA-133 Controls Brown Adipose Determination in Skeletal Muscle Satellite Cells by Targeting Prdm16

Yin, Hang, Pasut, Alessandra, Soleimani, Vahab D., Bentzinger, C. Florian, Antoun, Ghadi, Thorn, Stephanie, Seale, Patrick, Fernando, Pasan, van IJcken, Wilfred, Grosveld, Frank, Dekemp, Robert A., Bo

Journal:

Cell Metabolism

Année:

2013

Langue:

english

Fichier:

PDF, 2.53 MB

english, 2013

39

Early divergence of Th1 and Th2 transcriptomes involves a small core response and sets of transiently expressed genes

van den Ham, Henk-Jan, de Waal, Leon, Zaaraoui-Boutahar, Fatiha, Bijl, Maarten, van IJcken, Wilfred F. J., Osterhaus, Albert D.M.E., de Boer, Rob J., Andeweg, Arno C.

Journal:

European Journal of Immunology

Année:

2013

Langue:

english

Fichier:

PDF, 1.05 MB

english, 2013

40

MiR-17-92 and miR-221/222 cluster members target KIT and ETV1 in human gastrointestinal stromal tumours

Gits, C M M, van Kuijk, P F, Jonkers, M B E, Boersma, A W M, van IJcken, W F, Wozniak, A, Sciot, R, Rutkowski, P, Schöffski, P, Taguchi, T, Mathijssen, R H J, Verweij, J, Sleijfer, S, Debiec-Rychter,

Journal:

British Journal of Cancer

Année:

2013

Langue:

english

Fichier:

PDF, 2.60 MB

english, 2013

41

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells

Zuin, J., Dixon, J. R., van der Reijden, M. I. J. A., Ye, Z., Kolovos, P., Brouwer, R. W. W., van de Corput, M. P. C., van de Werken, H. J. G., Knoch, T. A., van IJcken, W. F. J., Grosveld, F. G., Ren

Journal:

Proceedings of the National Academy of Sciences

Année:

2014

Langue:

english

Fichier:

PDF, 1.28 MB

english, 2014

42

Exome sequencing and functional analyses suggest that SIX6 is a gene involved in an altered proliferation-differentiation balance early in life and optic nerve degeneration at old age

Iglesias, A. I., Springelkamp, H., van der Linde, H., Severijnen, L.-A., Amin, N., Oostra, B., Kockx, C. E. M., van den Hout, M. C. G. N., van IJcken, W. F. J., Hofman, A., Uitterlinden, A. G., Verdij

Journal:

Human Molecular Genetics

Année:

2014

Langue:

english

Fichier:

PDF, 1.06 MB

english, 2014

43

Two independent transcription initiation codes overlap on vertebrate core promoters

Haberle, Vanja, Li, Nan, Hadzhiev, Yavor, Plessy, Charles, Previti, Christopher, Nepal, Chirag, Gehrig, Jochen, Dong, Xianjun, Akalin, Altuna, Suzuki, Ana Maria, van IJcken, Wilfred F. J., Armant, Oli

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 6.63 MB

english, 2014

44

DNA damage responsive microRNAs misexpressed in human cancer modulate therapy sensitivity

van Jaarsveld, Marijn T.M., Wouters, Maikel D., Boersma, Antonius W.M., Smid, Marcel, van IJcken, Wilfred F.J., Mathijssen, Ron H.J., Hoeijmakers, Jan H.J., Martens, John W.M., van Laere, Steven, Wiem

Journal:

Molecular Oncology

Année:

2014

Langue:

english

Fichier:

PDF, 1.96 MB

english, 2014

45

Balancing of Histone H3K4 Methylation States by the Kdm5c/SMCX Histone Demethylase Modulates Promoter and Enhancer Function

Outchkourov, Nikolay S., Muiño, Jose M., Kaufmann, Kerstin, van IJcken, Wilfred F.J., Koerkamp, Marian J. Groot, van Leenen, Dik, de Graaf, Petra, Holstege, Frank C.P., Grosveld, Frank G., Timmers, H.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.53 MB

english, 2013

46

BACH2: A marker of DNA damage and ageing

Uittenboogaard, L.M., Payan-Gomez, C., Pothof, J., van IJcken, W., Mastroberardino, P.G., van der Pluijm, I., Hoeijmakers, J.H.J., Tresini, M.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2013

47

The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation

Soler, E., Andrieu-Soler, C., de Boer, E., Bryne, J. C., Thongjuea, S., Stadhouders, R., Palstra, R.-J., Stevens, M., Kockx, C., van IJcken, W., Hou, J., Steinhoff, C., Rijkers, E., Lenhard, B., Grosv

Journal:

Genes & Development

Année:

2010

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2010

48

CITED2 and NCOR2 in anti-oestrogen resistance and progression of breast cancer

van Agthoven, T, Sieuwerts, A M, Veldscholte, J, Meijer-van Gelder, M E, Smid, M, Brinkman, A, den Dekker, A T, Leroy, I M, van IJcken, W F J, Sleijfer, S, Foekens, J A, Dorssers, L C J

Journal:

British Journal of Cancer

Année:

2009

Langue:

english

Fichier:

PDF, 525 KB

english, 2009

49

Gene Expression Profiling To Predict and Assess the Consequences of Therapy-Induced Virus Eradication in Chronic Hepatitis C Virus Infection

Hou, J., van Oord, G., Groothuismink, Z. M. A., Claassen, M. A. A., Kreefft, K., Zaaraoui-Boutahar, F., van IJcken, W. F. J., Osterhaus, A. D. M. E., Janssen, H. L. A., Andeweg, A. C., de Knegt, R. J.

Journal:

Journal of Virology

Année:

2014

Langue:

english

Fichier:

PDF, 1.78 MB

english, 2014

50

Global quantitative proteomics reveals novel factors in the ecdysone signaling pathway in Drosophila melanogaster

Sap, Karen A., Bezstarosti, Karel, Dekkers, Dick H. W., van den Hout, Mirjam, van Ijcken, Wilfred, Rijkers, Erikjan, Demmers, Jeroen A. A.

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.02 MB

english, 2015